PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509733.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 315aa    MW: 36244.1 Da    PI: 7.268
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.3e-13111162155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r +h  +Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  XP_004509733.1 111 QRITHITVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 162
                     699***************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.58E-16109178IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.49E-12109166No hitNo description
PROSITE profilePS5088814.589110161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-10111162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-13112176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-9116167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MALETLSSSN NDFSNFIIYD TISATPFSTT TTESHNNICF LENRMNNELA FDHNNNNYDV  60
MMKNRKRQCS RENEEEEEEE RIGNSKQMVQ GRKKRRRKPR VCKNKEEAET QRITHITVER  120
NRRKQMNEHL AVLRSLMPES YVQRGDQASI VGGAIEFVKE LEHLLQSLEA KKLQLLQQEV  180
AQSNEDDTSI SKLMIRPPFA QFFVYPQYTW SQNPNKYTSK TKAAIADIEV TLIETHANLR  240
ILTRRRTGQL TKLVAGFQTL FLTILHLNVT TIDPLVFYSI SAKVEEGFQL GSVDGIATAV  300
HHILGRIEEE TSLCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19197RKKRRRK
29198RKKRRRKP
39297KKRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509733.10.0PREDICTED: transcription factor bHLH71
SwissprotQ9C7T45e-73BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A151R8871e-159A0A151R887_CAJCA; Transcription factor bHLH96
STRINGGLYMA08G36590.11e-154(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.18e-68bHLH family protein